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Data load

Adding existing databases​

This sections assumes that there is an existing database available. The database should be in a Postgres Docker container or external database with a Fully Qualified Domain Name (FQDN).

  • In the Admin Portal, go to Setup > Databases > Configure > Add database

    The expected display is: DatabaseListEmpty

  • Select Add database and provide the database information accordingly. Refer to this part of the documentation for more details on the input parameters for database creation.

    The expected result after adding a database is: DatabaseList

If there is no existing databases available, the following sample database can be used. After loading the database, continue with the guide from section Plugins onwards.

Plugins​

The Admin Portal allows the admin user to manage plugins in the platform, for instance installation, version updates, and uninstallation of plugins.

  • In the Admin Portal, go to Setup > Plugins > Configure. PluginTable

Jobs Portal​

The Admin Portal allows the admin user to perform customized and scheduled job runs from plugins that have been installed.

  • In the Admin Portal, go to Jobs and select the Jobs tab. JobsPortal

  • Select the ⋮ icon to perform the respective job functions.

  • Select Job Runs tab to get the job run status.

Creating Datasets​

  • In the Admin Portal, go to Datasets > Add dataset

    The expected display is:DatasetList

  • Provide the dataset parameters accordingly.

    The expected result upon successful addition of dataset: Datasets

Dataset Permissions​

The Admin Portal allows the admin to perform dataset management to provide users with permissions for selected datasets.

  • In the Admin Portal, go to Datasets.
  • Go to the dataset you wish to provide/revoke permission access for users.
  • Under Actions dropdown, select Permissions to view users who have requested for access or provide access to existing users.
  • Refer to the documentation here (../configuration/2-dataset-permissions.md) for a detailed guide on setting permissions.

Platform Configuration​

Generating Data Quality Dashboard (DQD)​

This section outlines the steps required for generating the Data Quality Dashboard for a dataset.

  • In the Admin Portal, go to Datasets. Go to the dataset of interest and click Select Action.

  • Select Run data quality and select the Run Analysis button.

  • Repeat the step for Run data characterization.

  • After completing the Data Quality and Data Characterization job runs, refer to the Researcher Portal to access the Data Quality Dashboard for the respective datasets.

    The expected result is: dqd-dashboard

Update Datasets Metadata​

  • In the Admin Portal, go to Datasets tab and select Update dataset metadata.
  • Refer to the documentation here for more details.